Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.78□□□□□ -0.2
Gabpb1Q00420 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gm29667-201ENSMUST00000190817 490 ntBASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.78□□□□□ -0.2
Gabpb1Q00420 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.78□□□□□ -0.2
Gabpb1Q00420 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gabpb1Q00420 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gabpb1Q00420 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gabpb1Q00420 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.77□□□□□ -0.21
Gabpb1Q00420 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.77□□□□□ -0.21
Gabpb1Q00420 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Gabpb1Q00420 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.77□□□□□ -0.21
Gabpb1Q00420 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.77□□□□□ -0.21
Gabpb1Q00420 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gabpb1Q00420 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm12151-201ENSMUST00000121374 290 ntBASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm14719-201ENSMUST00000121891 340 ntBASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm24694-201ENSMUST00000180054 110 ntBASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm27663-201ENSMUST00000184839 110 ntBASIC13.76□□□□□ -0.21
Gabpb1Q00420 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.76□□□□□ -0.21
Gabpb1Q00420 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Gm24447-201ENSMUST00000083977 338 ntBASIC13.76□□□□□ -0.21
Gabpb1Q00420 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gabpb1Q00420 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms