Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nphp4P59240 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nphp4P59240 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nphp4P59240 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC18.16■□□□□ 0.5
Nphp4P59240 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.16■□□□□ 0.5
Nphp4P59240 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC18.16■□□□□ 0.5
Nphp4P59240 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC18.16■□□□□ 0.5
Nphp4P59240 Gm7584-201ENSMUST00000175829 940 ntBASIC18.16■□□□□ 0.5
Nphp4P59240 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Gm43822-201ENSMUST00000200285 476 ntBASIC18.16■□□□□ 0.5
Nphp4P59240 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC18.16■□□□□ 0.5
Nphp4P59240 Gm7783-201ENSMUST00000204795 781 ntBASIC18.16■□□□□ 0.5
Nphp4P59240 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nphp4P59240 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Gm13350-201ENSMUST00000120519 479 ntBASIC18.15■□□□□ 0.5
Nphp4P59240 Gm13342-201ENSMUST00000121055 207 ntBASIC18.15■□□□□ 0.5
Nphp4P59240 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Nphp4P59240 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nphp4P59240 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC18.15■□□□□ 0.5
Nphp4P59240 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nphp4P59240 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nphp4P59240 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nphp4P59240 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nphp4P59240 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Gm14704-201ENSMUST00000120300 874 ntBASIC18.15■□□□□ 0.5
Nphp4P59240 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Nphp4P59240 Gm7895-201ENSMUST00000187459 1173 ntBASIC18.15■□□□□ 0.5
Nphp4P59240 Gm18584-201ENSMUST00000203098 964 ntBASIC18.15■□□□□ 0.5
Nphp4P59240 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC18.15■□□□□ 0.5
Nphp4P59240 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC18.15■□□□□ 0.5
Nphp4P59240 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC18.15■□□□□ 0.5
Nphp4P59240 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nphp4P59240 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Nphp4P59240 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nphp4P59240 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC18.14■□□□□ 0.49
Nphp4P59240 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nphp4P59240 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC18.14■□□□□ 0.49
Nphp4P59240 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC18.14■□□□□ 0.49
Nphp4P59240 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC18.14■□□□□ 0.49
Nphp4P59240 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC18.14■□□□□ 0.49
Nphp4P59240 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC18.14■□□□□ 0.49
Nphp4P59240 Gm38341-201ENSMUST00000195357 515 ntBASIC18.14■□□□□ 0.49
Nphp4P59240 Gm6334-201ENSMUST00000207083 228 ntBASIC18.14■□□□□ 0.49
Nphp4P59240 AC069562.3-201ENSMUST00000225387 587 ntBASIC18.14■□□□□ 0.49
Nphp4P59240 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nphp4P59240 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nphp4P59240 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nphp4P59240 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC18.13■□□□□ 0.49
Nphp4P59240 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms