Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm10175-201ENSMUST00000086013 645 ntBASIC13.03□□□□□ -0.32
Prox1P48437 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prox1P48437 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.03□□□□□ -0.32
Prox1P48437 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prox1P48437 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prox1P48437 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prox1P48437 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prox1P48437 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prox1P48437 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.03□□□□□ -0.32
Prox1P48437 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prox1P48437 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prox1P48437 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prox1P48437 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.02□□□□□ -0.32
Prox1P48437 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.02□□□□□ -0.32
Prox1P48437 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Prox1P48437 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prox1P48437 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Prox1P48437 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Gm2810-201ENSMUST00000118681 990 ntBASIC13.02□□□□□ -0.33
Prox1P48437 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.02□□□□□ -0.33
Prox1P48437 Gm26308-201ENSMUST00000157768 69 ntBASIC13.02□□□□□ -0.33
Prox1P48437 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.02□□□□□ -0.33
Prox1P48437 Gm38225-201ENSMUST00000194001 393 ntBASIC13.02□□□□□ -0.33
Prox1P48437 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.02□□□□□ -0.33
Prox1P48437 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.02□□□□□ -0.33
Prox1P48437 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.02□□□□□ -0.33
Prox1P48437 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Gm18057-201ENSMUST00000208220 503 ntBASIC13.02□□□□□ -0.33
Prox1P48437 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Prox1P48437 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Prox1P48437 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Prox1P48437 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Pck2-205ENSMUST00000226352 2784 ntBASIC13.02□□□□□ -0.33
Prox1P48437 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Prox1P48437 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Prox1P48437 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prox1P48437 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Prox1P48437 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Prox1P48437 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.01□□□□□ -0.33
Prox1P48437 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Prox1P48437 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Prox1P48437 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.01□□□□□ -0.33
Prox1P48437 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.01□□□□□ -0.33
Prox1P48437 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.01□□□□□ -0.33
Prox1P48437 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.01□□□□□ -0.33
Prox1P48437 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.01□□□□□ -0.33
Prox1P48437 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.01□□□□□ -0.33
Prox1P48437 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Prox1P48437 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Prox1P48437 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Prox1P48437 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.01□□□□□ -0.33
Prox1P48437 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.01□□□□□ -0.33
Prox1P48437 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prox1P48437 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Prox1P48437 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13□□□□□ -0.33
Prox1P48437 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Prox1P48437 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prox1P48437 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prox1P48437 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13□□□□□ -0.33
Prox1P48437 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13□□□□□ -0.33
Prox1P48437 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms