Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Sox2P48432 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox2P48432 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sox2P48432 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sox2P48432 Gm13015-201ENSMUST00000118674 204 ntBASIC12.7□□□□□ -0.38
Sox2P48432 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Sox2P48432 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.7□□□□□ -0.38
Sox2P48432 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Sox2P48432 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox2P48432 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox2P48432 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.7□□□□□ -0.38
Sox2P48432 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox2P48432 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Sox2P48432 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sox2P48432 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Sox2P48432 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox2P48432 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.69□□□□□ -0.38
Sox2P48432 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.69□□□□□ -0.38
Sox2P48432 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox2P48432 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox2P48432 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Sox2P48432 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox2P48432 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sox2P48432 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Sox2P48432 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.68□□□□□ -0.38
Sox2P48432 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sox2P48432 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sox2P48432 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.68□□□□□ -0.38
Sox2P48432 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.68□□□□□ -0.38
Sox2P48432 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.68□□□□□ -0.38
Sox2P48432 Gm18049-201ENSMUST00000208909 581 ntBASIC12.68□□□□□ -0.38
Sox2P48432 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.68□□□□□ -0.38
Sox2P48432 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms