Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Gm24543-201ENSMUST00000103867 82 ntBASIC12.76□□□□□ -0.37
Sox6P40645 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Gm25144-201ENSMUST00000179561 110 ntBASIC12.76□□□□□ -0.37
Sox6P40645 Gm25352-201ENSMUST00000179815 110 ntBASIC12.76□□□□□ -0.37
Sox6P40645 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox6P40645 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.76□□□□□ -0.37
Sox6P40645 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.76□□□□□ -0.37
Sox6P40645 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.76□□□□□ -0.37
Sox6P40645 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox6P40645 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.76□□□□□ -0.37
Sox6P40645 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox6P40645 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sox6P40645 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
Sox6P40645 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox6P40645 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox6P40645 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox6P40645 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sox6P40645 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox6P40645 Mir6956-201ENSMUST00000183598 62 ntBASIC12.75□□□□□ -0.37
Sox6P40645 Gm27622-201ENSMUST00000183779 60 ntBASIC12.75□□□□□ -0.37
Sox6P40645 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.75□□□□□ -0.37
Sox6P40645 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox6P40645 Gm44872-201ENSMUST00000207864 420 ntBASIC12.75□□□□□ -0.37
Sox6P40645 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.75□□□□□ -0.37
Sox6P40645 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sox6P40645 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.75□□□□□ -0.37
Sox6P40645 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Sox6P40645 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox6P40645 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.75□□□□□ -0.37
Sox6P40645 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox6P40645 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox6P40645 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sox6P40645 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sox6P40645 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox6P40645 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sox6P40645 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Sox6P40645 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox6P40645 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.74□□□□□ -0.37
Sox6P40645 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sox6P40645 Gm15920-201ENSMUST00000118998 402 ntBASIC12.74□□□□□ -0.37
Sox6P40645 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox6P40645 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.74□□□□□ -0.37
Sox6P40645 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.74□□□□□ -0.37
Sox6P40645 Gm28630-201ENSMUST00000187806 498 ntBASIC12.74□□□□□ -0.37
Sox6P40645 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.74□□□□□ -0.37
Sox6P40645 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sox6P40645 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sox6P40645 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sox6P40645 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms