Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Chd1P40201 AC153505.1-201ENSMUST00000218819 1071 ntBASIC19.9■□□□□ 0.78
Chd1P40201 AC165260.3-202ENSMUST00000224550 1031 ntBASIC19.9■□□□□ 0.78
Chd1P40201 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chd1P40201 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chd1P40201 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.9■□□□□ 0.78
Chd1P40201 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Gm25880-201ENSMUST00000104331 132 ntBASIC19.9■□□□□ 0.78
Chd1P40201 Gm45909-201ENSMUST00000212413 1031 ntBASIC19.9■□□□□ 0.78
Chd1P40201 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 AC169511.2-201ENSMUST00000226674 2063 ntBASIC19.9■□□□□ 0.78
Chd1P40201 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.9■□□□□ 0.78
Chd1P40201 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Chd1P40201 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Chd1P40201 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd1P40201 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
Chd1P40201 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.89■□□□□ 0.77
Chd1P40201 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC19.89■□□□□ 0.77
Chd1P40201 Gm16296-201ENSMUST00000159905 325 ntBASIC19.89■□□□□ 0.77
Chd1P40201 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Chd1P40201 Gm29155-201ENSMUST00000185910 269 ntBASIC19.89■□□□□ 0.77
Chd1P40201 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC19.89■□□□□ 0.77
Chd1P40201 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Chd1P40201 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.89■□□□□ 0.77
Chd1P40201 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd1P40201 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Chd1P40201 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Chd1P40201 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Chd1P40201 Gm11892-201ENSMUST00000117711 1202 ntBASIC19.88■□□□□ 0.77
Chd1P40201 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chd1P40201 Gm10731-201ENSMUST00000181171 448 ntBASIC19.88■□□□□ 0.77
Chd1P40201 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chd1P40201 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.88■□□□□ 0.77
Chd1P40201 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.88■□□□□ 0.77
Chd1P40201 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Chd1P40201 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chd1P40201 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd1P40201 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC19.88■□□□□ 0.77
Chd1P40201 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC19.88■□□□□ 0.77
Chd1P40201 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC19.88■□□□□ 0.77
Chd1P40201 Gm21811-201ENSMUST00000096485 930 ntBASIC19.88■□□□□ 0.77
Chd1P40201 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.87■□□□□ 0.77
Chd1P40201 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Gm6992-201ENSMUST00000217973 1607 ntBASIC19.87■□□□□ 0.77
Chd1P40201 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Chd1P40201 Gm12501-201ENSMUST00000119163 529 ntBASIC19.87■□□□□ 0.77
Chd1P40201 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC19.87■□□□□ 0.77
Chd1P40201 Gm3028-201ENSMUST00000213805 1119 ntBASIC19.87■□□□□ 0.77
Chd1P40201 Ginm1-202ENSMUST00000065124 300 ntBASIC19.87■□□□□ 0.77
Chd1P40201 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.87■□□□□ 0.77
Chd1P40201 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC19.87■□□□□ 0.77
Chd1P40201 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd1P40201 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms