Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.37□□□□□ -0.27
HmgclP38060 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HmgclP38060 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HmgclP38060 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.37□□□□□ -0.27
HmgclP38060 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HmgclP38060 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
HmgclP38060 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
HmgclP38060 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HmgclP38060 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.36□□□□□ -0.27
HmgclP38060 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
HmgclP38060 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
HmgclP38060 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.36□□□□□ -0.27
HmgclP38060 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.36□□□□□ -0.27
HmgclP38060 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HmgclP38060 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HmgclP38060 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.36□□□□□ -0.27
HmgclP38060 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Acot6-202ENSMUST00000222921 3622 ntBASIC13.36□□□□□ -0.27
HmgclP38060 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HmgclP38060 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.36□□□□□ -0.27
HmgclP38060 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.36□□□□□ -0.27
HmgclP38060 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HmgclP38060 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HmgclP38060 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HmgclP38060 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.36□□□□□ -0.27
HmgclP38060 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.36□□□□□ -0.27
HmgclP38060 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.36□□□□□ -0.27
HmgclP38060 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HmgclP38060 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Rubie-203ENSMUST00000227803 2430 ntBASIC13.35□□□□□ -0.27
HmgclP38060 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.35□□□□□ -0.27
HmgclP38060 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HmgclP38060 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.35□□□□□ -0.27
HmgclP38060 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Gm12859-201ENSMUST00000117834 427 ntBASIC13.35□□□□□ -0.27
HmgclP38060 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.35□□□□□ -0.27
HmgclP38060 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Gm5866-201ENSMUST00000177881 973 ntBASIC13.35□□□□□ -0.27
HmgclP38060 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.35□□□□□ -0.27
HmgclP38060 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.35□□□□□ -0.27
HmgclP38060 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.35□□□□□ -0.27
HmgclP38060 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HmgclP38060 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.35□□□□□ -0.27
HmgclP38060 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.35□□□□□ -0.27
HmgclP38060 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HmgclP38060 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HmgclP38060 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HmgclP38060 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HmgclP38060 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms