Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Gm13385-201ENSMUST00000121089 220 ntBASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Auts2-212ENSMUST00000178555 309 ntBASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfrsf1aP25118 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Gm27618-201ENSMUST00000183671 60 ntBASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfrsf1aP25118 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms