Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.93□□□□□ -0.5
Ccl3P10855 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.93□□□□□ -0.5
Ccl3P10855 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccl3P10855 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccl3P10855 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccl3P10855 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccl3P10855 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl3P10855 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Ccl3P10855 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccl3P10855 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccl3P10855 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccl3P10855 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccl3P10855 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccl3P10855 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccl3P10855 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccl3P10855 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.92□□□□□ -0.5
Ccl3P10855 Gm15370-201ENSMUST00000117158 253 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 Gm11591-201ENSMUST00000120063 702 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Gm2991-201ENSMUST00000173338 480 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 Mir3102-201ENSMUST00000175555 104 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 Gm38158-201ENSMUST00000194617 339 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccl3P10855 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccl3P10855 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccl3P10855 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Gm8227-201ENSMUST00000223306 571 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccl3P10855 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccl3P10855 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.92□□□□□ -0.5
Ccl3P10855 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Ccl3P10855 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl3P10855 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.91□□□□□ -0.5
Ccl3P10855 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccl3P10855 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Mir877-201ENSMUST00000104738 85 ntBASIC11.91□□□□□ -0.5
Ccl3P10855 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.91□□□□□ -0.5
Ccl3P10855 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Gm37259-201ENSMUST00000193903 849 ntBASIC11.91□□□□□ -0.5
Ccl3P10855 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccl3P10855 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.91□□□□□ -0.5
Ccl3P10855 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.91□□□□□ -0.5
Ccl3P10855 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl3P10855 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms