Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
UbbP0CG49 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
UbbP0CG49 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UbbP0CG49 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.8□□□□□ -0.52
UbbP0CG49 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
UbbP0CG49 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.8□□□□□ -0.52
UbbP0CG49 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.8□□□□□ -0.52
UbbP0CG49 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UbbP0CG49 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.8□□□□□ -0.52
UbbP0CG49 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UbbP0CG49 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.79□□□□□ -0.52
UbbP0CG49 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
UbbP0CG49 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.79□□□□□ -0.52
UbbP0CG49 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.79□□□□□ -0.52
UbbP0CG49 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UbbP0CG49 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.79□□□□□ -0.52
UbbP0CG49 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.79□□□□□ -0.52
UbbP0CG49 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UbbP0CG49 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
UbbP0CG49 Gm25287-201ENSMUST00000103846 110 ntBASIC11.78□□□□□ -0.52
UbbP0CG49 Gm22918-201ENSMUST00000103855 110 ntBASIC11.78□□□□□ -0.52
UbbP0CG49 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.78□□□□□ -0.52
UbbP0CG49 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.78□□□□□ -0.52
UbbP0CG49 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Gm5566-201ENSMUST00000116118 459 ntBASIC11.78□□□□□ -0.52
UbbP0CG49 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UbbP0CG49 Gm11745-201ENSMUST00000121669 448 ntBASIC11.78□□□□□ -0.52
UbbP0CG49 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.78□□□□□ -0.52
UbbP0CG49 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
UbbP0CG49 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.78□□□□□ -0.52
UbbP0CG49 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms