Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Polr2aP08775 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.18■□□□□ 0.02
Polr2aP08775 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Polr2aP08775 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Gm37201-201ENSMUST00000191845 523 ntBASIC15.18■□□□□ 0.02
Polr2aP08775 Gm42997-202ENSMUST00000200321 985 ntBASIC15.18■□□□□ 0.02
Polr2aP08775 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Polr2aP08775 Gm22058-201ENSMUST00000083393 310 ntBASIC15.18■□□□□ 0.02
Polr2aP08775 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Polr2aP08775 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Polr2aP08775 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.18■□□□□ 0.02
Polr2aP08775 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Gm8566-201ENSMUST00000120174 465 ntBASIC15.18■□□□□ 0.02
Polr2aP08775 Mir1943-201ENSMUST00000158276 73 ntBASIC15.18■□□□□ 0.02
Polr2aP08775 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.18■□□□□ 0.02
Polr2aP08775 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.18■□□□□ 0.02
Polr2aP08775 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.18■□□□□ 0.02
Polr2aP08775 Gm5904-201ENSMUST00000210286 865 ntBASIC15.18■□□□□ 0.02
Polr2aP08775 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Polr2aP08775 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Polr2aP08775 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Polr2aP08775 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Polr2aP08775 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Polr2aP08775 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Polr2aP08775 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.17■□□□□ 0.02
Polr2aP08775 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.17■□□□□ 0.02
Polr2aP08775 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.17■□□□□ 0.02
Polr2aP08775 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
Polr2aP08775 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.17■□□□□ 0.02
Polr2aP08775 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Polr2aP08775 Gm13875-201ENSMUST00000120162 282 ntBASIC15.16■□□□□ 0.02
Polr2aP08775 Gm19459-201ENSMUST00000176240 835 ntBASIC15.16■□□□□ 0.02
Polr2aP08775 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.16■□□□□ 0.02
Polr2aP08775 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Gm5051-201ENSMUST00000204085 485 ntBASIC15.16■□□□□ 0.02
Polr2aP08775 Gm7848-201ENSMUST00000210739 718 ntBASIC15.16■□□□□ 0.02
Polr2aP08775 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Polr2aP08775 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.16■□□□□ 0.02
Polr2aP08775 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Polr2aP08775 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Polr2aP08775 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.16■□□□□ 0.02
Polr2aP08775 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.16■□□□□ 0.02
Polr2aP08775 Gm7003-201ENSMUST00000195089 312 ntBASIC15.16■□□□□ 0.02
Polr2aP08775 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms