Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.36□□□□□ -0.11
TnfP06804 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TnfP06804 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.36□□□□□ -0.11
TnfP06804 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TnfP06804 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
TnfP06804 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TnfP06804 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TnfP06804 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.35□□□□□ -0.11
TnfP06804 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
TnfP06804 Gm27731-201ENSMUST00000185192 107 ntBASIC14.35□□□□□ -0.11
TnfP06804 Gm45784-201ENSMUST00000188360 142 ntBASIC14.35□□□□□ -0.11
TnfP06804 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.35□□□□□ -0.11
TnfP06804 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TnfP06804 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.35□□□□□ -0.11
TnfP06804 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
TnfP06804 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.35□□□□□ -0.11
TnfP06804 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
TnfP06804 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.35□□□□□ -0.11
TnfP06804 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.35□□□□□ -0.11
TnfP06804 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TnfP06804 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.34□□□□□ -0.11
TnfP06804 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.34□□□□□ -0.11
TnfP06804 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.34□□□□□ -0.11
TnfP06804 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.34□□□□□ -0.11
TnfP06804 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TnfP06804 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Gm8213-201ENSMUST00000118191 441 ntBASIC14.34□□□□□ -0.11
TnfP06804 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.34□□□□□ -0.11
TnfP06804 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.34□□□□□ -0.11
TnfP06804 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.34□□□□□ -0.11
TnfP06804 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.34□□□□□ -0.11
TnfP06804 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.34□□□□□ -0.11
TnfP06804 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.34□□□□□ -0.11
TnfP06804 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TnfP06804 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.34□□□□□ -0.11
TnfP06804 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TnfP06804 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TnfP06804 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TnfP06804 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TnfP06804 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
TnfP06804 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TnfP06804 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TnfP06804 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TnfP06804 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TnfP06804 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
TnfP06804 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TnfP06804 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.33□□□□□ -0.12
TnfP06804 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.33□□□□□ -0.12
TnfP06804 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.33□□□□□ -0.12
TnfP06804 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Gm14660-201ENSMUST00000119809 575 ntBASIC14.33□□□□□ -0.12
TnfP06804 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms