Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoa4P06728 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoa4P06728 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Apoa4P06728 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Apoa4P06728 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Apoa4P06728 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.35□□□□□ -0.27
Apoa4P06728 Gm25948-201ENSMUST00000175334 112 ntBASIC13.35□□□□□ -0.27
Apoa4P06728 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.35□□□□□ -0.27
Apoa4P06728 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.35□□□□□ -0.27
Apoa4P06728 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Apoa4P06728 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.34□□□□□ -0.27
Apoa4P06728 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Apoa4P06728 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Apoa4P06728 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.34□□□□□ -0.27
Apoa4P06728 Mir1897-201ENSMUST00000122581 272 ntBASIC13.34□□□□□ -0.27
Apoa4P06728 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Apoa4P06728 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.34□□□□□ -0.27
Apoa4P06728 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.34□□□□□ -0.27
Apoa4P06728 Shd-206ENSMUST00000225145 998 ntBASIC13.34□□□□□ -0.27
Apoa4P06728 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Apoa4P06728 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.34□□□□□ -0.27
Apoa4P06728 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Apoa4P06728 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Apoa4P06728 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Apoa4P06728 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Apoa4P06728 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Apoa4P06728 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Apoa4P06728 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Apoa4P06728 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Apoa4P06728 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Apoa4P06728 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Apoa4P06728 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Apoa4P06728 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Apoa4P06728 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.33□□□□□ -0.28
Apoa4P06728 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Apoa4P06728 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.33□□□□□ -0.28
Apoa4P06728 Gm21470-201ENSMUST00000187680 696 ntBASIC13.33□□□□□ -0.28
Apoa4P06728 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Apoa4P06728 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.33□□□□□ -0.28
Apoa4P06728 Gm5425-201ENSMUST00000214125 459 ntBASIC13.33□□□□□ -0.28
Apoa4P06728 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Apoa4P06728 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Apoa4P06728 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Apoa4P06728 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Apoa4P06728 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Apoa4P06728 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms