Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
P04224 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.91□□□□□ -0.5
P04224 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
P04224 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
P04224 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
P04224 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.91□□□□□ -0.5
P04224 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.91□□□□□ -0.5
P04224 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.91□□□□□ -0.5
P04224 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P04224 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
P04224 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
P04224 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
P04224 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
P04224 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.9□□□□□ -0.5
P04224 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
P04224 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P04224 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
P04224 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
P04224 Gm45747-201ENSMUST00000212203 999 ntBASIC11.9□□□□□ -0.5
P04224 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.9□□□□□ -0.5
P04224 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04224 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
P04224 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P04224 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
P04224 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P04224 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.89□□□□□ -0.51
P04224 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.89□□□□□ -0.51
P04224 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.89□□□□□ -0.51
P04224 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
P04224 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
P04224 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P04224 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.89□□□□□ -0.51
P04224 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Gm12350-201ENSMUST00000121208 462 ntBASIC11.89□□□□□ -0.51
P04224 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.89□□□□□ -0.51
P04224 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.89□□□□□ -0.51
P04224 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.89□□□□□ -0.51
P04224 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.89□□□□□ -0.51
P04224 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.89□□□□□ -0.51
P04224 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
P04224 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P04224 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P04224 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.89□□□□□ -0.51
P04224 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04224 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms