Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04213 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04213 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04213 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04213 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04213 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04213 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.02□□□□□ -0.33
P04213 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.02□□□□□ -0.33
P04213 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.02□□□□□ -0.33
P04213 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04213 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
P04213 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.01□□□□□ -0.33
P04213 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
P04213 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.01□□□□□ -0.33
P04213 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
P04213 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.01□□□□□ -0.33
P04213 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.01□□□□□ -0.33
P04213 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
P04213 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
P04213 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
P04213 Gm5425-201ENSMUST00000214125 459 ntBASIC13.01□□□□□ -0.33
P04213 Gm17795-201ENSMUST00000214505 757 ntBASIC13.01□□□□□ -0.33
P04213 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.01□□□□□ -0.33
P04213 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
P04213 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
P04213 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
P04213 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.01□□□□□ -0.33
P04213 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04213 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
P04213 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13□□□□□ -0.33
P04213 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Gm38577-201ENSMUST00000221531 4545 ntBASIC13□□□□□ -0.33
P04213 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13□□□□□ -0.33
P04213 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13□□□□□ -0.33
P04213 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13□□□□□ -0.33
P04213 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13□□□□□ -0.33
P04213 Gm29667-201ENSMUST00000190817 490 ntBASIC13□□□□□ -0.33
P04213 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13□□□□□ -0.33
P04213 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13□□□□□ -0.33
P04213 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13□□□□□ -0.33
P04213 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
P04213 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P04213 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04213 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms