Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14□□□□□ -0.17
CopeO89079 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopeO89079 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14□□□□□ -0.17
CopeO89079 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopeO89079 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopeO89079 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14□□□□□ -0.17
CopeO89079 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CopeO89079 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CopeO89079 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CopeO89079 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopeO89079 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14□□□□□ -0.17
CopeO89079 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopeO89079 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CopeO89079 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14□□□□□ -0.17
CopeO89079 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.99□□□□□ -0.17
CopeO89079 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.99□□□□□ -0.17
CopeO89079 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.99□□□□□ -0.17
CopeO89079 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.99□□□□□ -0.17
CopeO89079 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CopeO89079 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.99□□□□□ -0.17
CopeO89079 Gm33320-201ENSMUST00000192232 530 ntBASIC13.99□□□□□ -0.17
CopeO89079 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.99□□□□□ -0.17
CopeO89079 Gm16476-201ENSMUST00000221544 139 ntBASIC13.99□□□□□ -0.17
CopeO89079 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.99□□□□□ -0.17
CopeO89079 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.99□□□□□ -0.17
CopeO89079 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CopeO89079 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.99□□□□□ -0.17
CopeO89079 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CopeO89079 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.99□□□□□ -0.17
CopeO89079 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CopeO89079 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CopeO89079 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopeO89079 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.98□□□□□ -0.17
CopeO89079 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.98□□□□□ -0.17
CopeO89079 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.98□□□□□ -0.17
CopeO89079 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.98□□□□□ -0.17
CopeO89079 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Gm13365-201ENSMUST00000121188 973 ntBASIC13.98□□□□□ -0.17
CopeO89079 Gm29541-201ENSMUST00000191351 678 ntBASIC13.98□□□□□ -0.17
CopeO89079 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.98□□□□□ -0.17
CopeO89079 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CopeO89079 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CopeO89079 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.98□□□□□ -0.17
CopeO89079 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CopeO89079 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CopeO89079 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.98□□□□□ -0.17
CopeO89079 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopeO89079 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.97□□□□□ -0.17
CopeO89079 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.97□□□□□ -0.17
CopeO89079 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CopeO89079 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CopeO89079 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CopeO89079 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.97□□□□□ -0.17
CopeO89079 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.97□□□□□ -0.17
CopeO89079 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.97□□□□□ -0.17
CopeO89079 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CopeO89079 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms