Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hcn1O88704 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hcn1O88704 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hcn1O88704 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Hcn1O88704 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Hcn1O88704 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hcn1O88704 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hcn1O88704 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hcn1O88704 Gm44608-201ENSMUST00000206827 855 ntBASIC13.02□□□□□ -0.33
Hcn1O88704 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.02□□□□□ -0.33
Hcn1O88704 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.02□□□□□ -0.33
Hcn1O88704 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hcn1O88704 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Hcn1O88704 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.02□□□□□ -0.33
Hcn1O88704 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcn1O88704 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hcn1O88704 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hcn1O88704 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hcn1O88704 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Hcn1O88704 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.01□□□□□ -0.33
Hcn1O88704 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hcn1O88704 Gm15460-201ENSMUST00000118147 391 ntBASIC13.01□□□□□ -0.33
Hcn1O88704 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.01□□□□□ -0.33
Hcn1O88704 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.01□□□□□ -0.33
Hcn1O88704 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.01□□□□□ -0.33
Hcn1O88704 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hcn1O88704 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
Hcn1O88704 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.01□□□□□ -0.33
Hcn1O88704 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcn1O88704 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13□□□□□ -0.33
Hcn1O88704 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13□□□□□ -0.33
Hcn1O88704 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Hcn1O88704 Gm9109-201ENSMUST00000120254 1405 ntBASIC13□□□□□ -0.33
Hcn1O88704 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hcn1O88704 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13□□□□□ -0.33
Hcn1O88704 Gm27437-201ENSMUST00000183429 107 ntBASIC13□□□□□ -0.33
Hcn1O88704 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Hcn1O88704 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Hcn1O88704 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Gm14752-201ENSMUST00000120719 2075 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms