Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Vti1bO88384 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.96□□□□□ -0.34
Vti1bO88384 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1bO88384 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.95□□□□□ -0.34
Vti1bO88384 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.95□□□□□ -0.34
Vti1bO88384 Gm15920-201ENSMUST00000118998 402 ntBASIC12.95□□□□□ -0.34
Vti1bO88384 Gm12428-201ENSMUST00000119844 727 ntBASIC12.95□□□□□ -0.34
Vti1bO88384 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.95□□□□□ -0.34
Vti1bO88384 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.95□□□□□ -0.34
Vti1bO88384 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.95□□□□□ -0.34
Vti1bO88384 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vti1bO88384 Mir6956-201ENSMUST00000183598 62 ntBASIC12.95□□□□□ -0.34
Vti1bO88384 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.95□□□□□ -0.34
Vti1bO88384 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vti1bO88384 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vti1bO88384 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1bO88384 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.95□□□□□ -0.34
Vti1bO88384 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.94□□□□□ -0.34
Vti1bO88384 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Vti1bO88384 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vti1bO88384 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Vti1bO88384 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vti1bO88384 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.94□□□□□ -0.34
Vti1bO88384 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.94□□□□□ -0.34
Vti1bO88384 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.94□□□□□ -0.34
Vti1bO88384 Gm44608-201ENSMUST00000206827 855 ntBASIC12.94□□□□□ -0.34
Vti1bO88384 Gm44872-201ENSMUST00000207864 420 ntBASIC12.94□□□□□ -0.34
Vti1bO88384 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.94□□□□□ -0.34
Vti1bO88384 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vti1bO88384 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Vti1bO88384 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1bO88384 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vti1bO88384 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Vti1bO88384 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vti1bO88384 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vti1bO88384 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Gm15653-201ENSMUST00000119247 907 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms