Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.51■□□□□ 0.23
Mmp8O70138 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.51■□□□□ 0.23
Mmp8O70138 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Mmp8O70138 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp8O70138 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.5■□□□□ 0.23
Mmp8O70138 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.5■□□□□ 0.23
Mmp8O70138 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.5■□□□□ 0.23
Mmp8O70138 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.5■□□□□ 0.23
Mmp8O70138 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.5■□□□□ 0.23
Mmp8O70138 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.5■□□□□ 0.23
Mmp8O70138 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.5■□□□□ 0.23
Mmp8O70138 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.5■□□□□ 0.23
Mmp8O70138 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.5■□□□□ 0.23
Mmp8O70138 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Mmp8O70138 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
Mmp8O70138 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Mmp8O70138 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.5■□□□□ 0.23
Mmp8O70138 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.5■□□□□ 0.23
Mmp8O70138 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp8O70138 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.5■□□□□ 0.23
Mmp8O70138 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Gm5687-201ENSMUST00000118252 640 ntBASIC16.49■□□□□ 0.23
Mmp8O70138 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.49■□□□□ 0.23
Mmp8O70138 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Mmp8O70138 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Mmp8O70138 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp8O70138 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Mmp8O70138 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Mmp8O70138 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Mmp8O70138 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.48■□□□□ 0.23
Mmp8O70138 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.48■□□□□ 0.23
Mmp8O70138 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.48■□□□□ 0.23
Mmp8O70138 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.48■□□□□ 0.23
Mmp8O70138 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.48■□□□□ 0.23
Mmp8O70138 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms