Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stag2O35638 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stag2O35638 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Stag2O35638 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Stag2O35638 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stag2O35638 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Stag2O35638 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stag2O35638 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stag2O35638 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Stag2O35638 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stag2O35638 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.52■□□□□ 0.07
Stag2O35638 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stag2O35638 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.51■□□□□ 0.07
Stag2O35638 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Stag2O35638 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.51■□□□□ 0.07
Stag2O35638 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.51■□□□□ 0.07
Stag2O35638 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.51■□□□□ 0.07
Stag2O35638 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.51■□□□□ 0.07
Stag2O35638 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.51■□□□□ 0.07
Stag2O35638 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.51■□□□□ 0.07
Stag2O35638 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Stag2O35638 Gm8652-201ENSMUST00000181363 964 ntBASIC15.51■□□□□ 0.07
Stag2O35638 Gm18187-201ENSMUST00000196476 984 ntBASIC15.51■□□□□ 0.07
Stag2O35638 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.51■□□□□ 0.07
Stag2O35638 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Acot6-202ENSMUST00000222921 3622 ntBASIC15.51■□□□□ 0.07
Stag2O35638 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.51■□□□□ 0.07
Stag2O35638 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.51■□□□□ 0.07
Stag2O35638 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stag2O35638 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Stag2O35638 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.5■□□□□ 0.07
Stag2O35638 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Stag2O35638 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.5■□□□□ 0.07
Stag2O35638 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.5■□□□□ 0.07
Stag2O35638 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.5■□□□□ 0.07
Stag2O35638 Gm13612-201ENSMUST00000119276 390 ntBASIC15.5■□□□□ 0.07
Stag2O35638 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.5■□□□□ 0.07
Stag2O35638 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.5■□□□□ 0.07
Stag2O35638 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.5■□□□□ 0.07
Stag2O35638 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Stag2O35638 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Stag2O35638 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.5■□□□□ 0.07
Stag2O35638 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.5■□□□□ 0.07
Stag2O35638 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.5■□□□□ 0.07
Stag2O35638 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.5■□□□□ 0.07
Stag2O35638 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stag2O35638 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stag2O35638 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Stag2O35638 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stag2O35638 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Stag2O35638 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stag2O35638 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Stag2O35638 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.49■□□□□ 0.07
Stag2O35638 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stag2O35638 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Stag2O35638 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms