Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm37827-201ENSMUST00000194486 1542 ntBASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm4782-201ENSMUST00000168705 2046 ntBASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcf11G3X9Z4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Mir3547-201ENSMUST00000175461 88 ntBASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC20.18■□□□□ 0.82
Pcf11G3X9Z4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm9004-201ENSMUST00000218739 1222 ntBASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm19221-201ENSMUST00000221827 1477 ntBASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Gm29199-201ENSMUST00000187766 775 ntBASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcf11G3X9Z4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Mir3102-201ENSMUST00000175555 104 ntBASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcf11G3X9Z4 Gm7993-201ENSMUST00000200970 1384 ntBASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Gm2383-201ENSMUST00000181461 807 ntBASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcf11G3X9Z4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms