Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Gm5354-201ENSMUST00000182417 973 ntBASIC12.29□□□□□ -0.44
Gm3543D3Z235 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Gm17795-201ENSMUST00000214505 757 ntBASIC12.29□□□□□ -0.44
Gm3543D3Z235 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3543D3Z235 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.28□□□□□ -0.44
Gm3543D3Z235 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Gm14928-201ENSMUST00000120198 477 ntBASIC12.28□□□□□ -0.44
Gm3543D3Z235 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Mir6392-201ENSMUST00000184924 108 ntBASIC12.28□□□□□ -0.44
Gm3543D3Z235 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.28□□□□□ -0.44
Gm3543D3Z235 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.28□□□□□ -0.44
Gm3543D3Z235 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms