Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gm15693-201ENSMUST00000120470 637 ntBASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 AW822252-206ENSMUST00000208904 237 ntBASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Shd-206ENSMUST00000225145 998 ntBASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Gm15678-201ENSMUST00000117573 960 ntBASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Gm10766-202ENSMUST00000194123 606 ntBASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12-1A0N8R1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Mir874-201ENSMUST00000104769 76 ntBASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gm6912-201ENSMUST00000117218 544 ntBASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gm6415-201ENSMUST00000118488 348 ntBASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gm15393-201ENSMUST00000120499 219 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms