Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Gm26308-201ENSMUST00000157768 69 ntBASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Gm28630-201ENSMUST00000187806 498 ntBASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Gm27622-201ENSMUST00000183779 60 ntBASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Gm43575-201ENSMUST00000196420 516 ntBASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav5-4A0A075B652 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav5-4A0A075B652 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms