Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm5779-201ENSMUST00000218467 910 ntBASIC12.25□□□□□ -0.45
H2afb3S4R1G7 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.25□□□□□ -0.45
H2afb3S4R1G7 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Gm6415-201ENSMUST00000118488 348 ntBASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Gm5312-201ENSMUST00000203728 547 ntBASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.24□□□□□ -0.45
H2afb3S4R1G7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Mir449b-201ENSMUST00000104833 80 ntBASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Gm15460-201ENSMUST00000118147 391 ntBASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Mir1897-201ENSMUST00000122581 272 ntBASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb3S4R1G7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms