Protein–RNA interactions for Protein: Q9R1P1

Psmb3, Proteasome subunit beta type-3, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb3Q9R1P1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Psmb3Q9R1P1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.33□□□□□ -0.6
Psmb3Q9R1P1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Psmb3Q9R1P1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.33□□□□□ -0.6
Psmb3Q9R1P1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Psmb3Q9R1P1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Psmb3Q9R1P1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Psmb3Q9R1P1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Psmb3Q9R1P1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Gm15427-201ENSMUST00000117288 531 ntBASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Gm17271-201ENSMUST00000165535 355 ntBASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Gm44492-201ENSMUST00000197012 141 ntBASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Gm44771-201ENSMUST00000206975 626 ntBASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.32□□□□□ -0.6
Psmb3Q9R1P1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Gm9385-201ENSMUST00000117563 472 ntBASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Psmb3Q9R1P1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Psmb3Q9R1P1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Psmb3Q9R1P1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Psmb3Q9R1P1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms