Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm23936-201ENSMUST00000179354 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm22619-201ENSMUST00000179516 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm25255-201ENSMUST00000179579 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm24755-201ENSMUST00000179691 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm26506-201ENSMUST00000179692 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm25086-201ENSMUST00000179931 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm23243-201ENSMUST00000180047 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm24659-201ENSMUST00000180212 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm24169-201ENSMUST00000180244 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm23689-201ENSMUST00000180354 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm27359-201ENSMUST00000184153 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm27785-201ENSMUST00000184268 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm27466-201ENSMUST00000184396 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm27703-201ENSMUST00000184836 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Gm29741-201ENSMUST00000192667 421 ntBASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Chchd1-203ENSMUST00000224633 557 ntBASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Mir497b-201ENSMUST00000093601 125 ntBASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Chaf1aQ9QWF0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Gm16476-201ENSMUST00000221544 139 ntBASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1aQ9QWF0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms