Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdc40Q9DC48 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Gm21470-201ENSMUST00000187680 696 ntBASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Gm43433-201ENSMUST00000196573 481 ntBASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdc40Q9DC48 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.62□□□□□ -0.39
Cdc40Q9DC48 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdc40Q9DC48 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms