Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nip7Q9CXK8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nip7Q9CXK8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Gm12241-201ENSMUST00000118330 726 ntBASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Gm2231-201ENSMUST00000125661 612 ntBASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Gm10608-202ENSMUST00000213924 676 ntBASIC16.83■□□□□ 0.28
Nip7Q9CXK8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nip7Q9CXK8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Gm6447-201ENSMUST00000118905 835 ntBASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Gm12134-201ENSMUST00000122109 520 ntBASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Gm13786-201ENSMUST00000122371 333 ntBASIC16.82■□□□□ 0.28
Nip7Q9CXK8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nip7Q9CXK8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Gm15236-201ENSMUST00000117309 379 ntBASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.81■□□□□ 0.28
Nip7Q9CXK8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms