Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf135Q9CWS1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf135Q9CWS1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf135Q9CWS1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf135Q9CWS1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf135Q9CWS1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf135Q9CWS1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf135Q9CWS1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf135Q9CWS1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf135Q9CWS1 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Mir698-201ENSMUST00000102164 109 ntBASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gm14719-201ENSMUST00000121891 340 ntBASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gm27533-201ENSMUST00000183800 152 ntBASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gm44344-201ENSMUST00000200287 129 ntBASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gm44855-201ENSMUST00000205725 362 ntBASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gm44719-201ENSMUST00000206404 149 ntBASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf135Q9CWS1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Gm15487-201ENSMUST00000122373 465 ntBASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Gm21470-201ENSMUST00000187680 696 ntBASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf135Q9CWS1 Syt7-204ENSMUST00000223586 1344 ntBASIC14.15□□□□□ -0.15
Rnf135Q9CWS1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf135Q9CWS1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms