Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retreg3Q9CQV4 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm42612-201ENSMUST00000197986 623 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm43170-201ENSMUST00000199827 612 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm10297-201ENSMUST00000207136 651 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm44554-201ENSMUST00000208738 147 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm17795-201ENSMUST00000214505 757 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm6218-201ENSMUST00000219812 628 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gm9797-201ENSMUST00000052902 613 ntBASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retreg3Q9CQV4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm5403-201ENSMUST00000117105 2795 ntBASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm5277-201ENSMUST00000164923 556 ntBASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm17983-201ENSMUST00000190766 594 ntBASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 Gm38280-201ENSMUST00000192610 158 ntBASIC13.81□□□□□ -0.2
Retreg3Q9CQV4 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms