Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RTRAFQ9CQE8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
RTRAFQ9CQE8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RTRAFQ9CQE8 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
RTRAFQ9CQE8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RTRAFQ9CQE8 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Gm7977-201ENSMUST00000193787 748 ntBASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Gm33142-201ENSMUST00000193913 867 ntBASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RTRAFQ9CQE8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Gm16026-204ENSMUST00000162652 683 ntBASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Gm17807-201ENSMUST00000186869 298 ntBASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms