Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.68■□□□□ 0.42
Rtn4Q99P72 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4Q99P72 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.68■□□□□ 0.42
Rtn4Q99P72 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4Q99P72 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn4Q99P72 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Mbnl2-204ENSMUST00000227012 2390 ntBASIC17.67■□□□□ 0.42
Rtn4Q99P72 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Gm11233-201ENSMUST00000122357 634 ntBASIC17.67■□□□□ 0.42
Rtn4Q99P72 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Gm37355-201ENSMUST00000193345 606 ntBASIC17.67■□□□□ 0.42
Rtn4Q99P72 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 CT025538.2-201ENSMUST00000226083 772 ntBASIC17.67■□□□□ 0.42
Rtn4Q99P72 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn4Q99P72 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Gm8215-201ENSMUST00000120627 990 ntBASIC17.66■□□□□ 0.42
Rtn4Q99P72 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC17.66■□□□□ 0.42
Rtn4Q99P72 Gm42433-201ENSMUST00000196806 940 ntBASIC17.66■□□□□ 0.42
Rtn4Q99P72 Gm5717-201ENSMUST00000198243 1062 ntBASIC17.66■□□□□ 0.42
Rtn4Q99P72 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC17.66■□□□□ 0.42
Rtn4Q99P72 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.66■□□□□ 0.42
Rtn4Q99P72 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.66■□□□□ 0.42
Rtn4Q99P72 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rtn4Q99P72 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC17.65■□□□□ 0.42
Rtn4Q99P72 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Gm33320-201ENSMUST00000192232 530 ntBASIC17.65■□□□□ 0.42
Rtn4Q99P72 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.65■□□□□ 0.42
Rtn4Q99P72 AA619741-201ENSMUST00000195095 646 ntBASIC17.65■□□□□ 0.42
Rtn4Q99P72 AU022133-201ENSMUST00000200601 873 ntBASIC17.65■□□□□ 0.42
Rtn4Q99P72 AC118006.2-201ENSMUST00000224167 962 ntBASIC17.65■□□□□ 0.42
Rtn4Q99P72 AC154424.1-201ENSMUST00000225883 799 ntBASIC17.65■□□□□ 0.42
Rtn4Q99P72 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtn4Q99P72 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms