Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.25□□□□□ -0.29
Msh4Q99MT2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.24□□□□□ -0.29
Msh4Q99MT2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gm22189-201ENSMUST00000103822 86 ntBASIC13.24□□□□□ -0.29
Msh4Q99MT2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gm37714-201ENSMUST00000194742 342 ntBASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.24□□□□□ -0.29
Msh4Q99MT2 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.24□□□□□ -0.29
Msh4Q99MT2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.24□□□□□ -0.29
Msh4Q99MT2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msh4Q99MT2 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.24□□□□□ -0.29
Msh4Q99MT2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Gm21854-201ENSMUST00000179901 471 ntBASIC13.23□□□□□ -0.29
Msh4Q99MT2 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.23□□□□□ -0.29
Msh4Q99MT2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.23□□□□□ -0.29
Msh4Q99MT2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Gm18027-201ENSMUST00000218947 619 ntBASIC13.23□□□□□ -0.29
Msh4Q99MT2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Gm9797-201ENSMUST00000052902 613 ntBASIC13.23□□□□□ -0.29
Msh4Q99MT2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msh4Q99MT2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms