Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Gm27680-201ENSMUST00000184192 160 ntBASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhga3Q91XY5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhga3Q91XY5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.15□□□□□ -0.47
Pcdhga3Q91XY5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhga3Q91XY5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Gm3436-201ENSMUST00000179930 840 ntBASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Mir6956-201ENSMUST00000183598 62 ntBASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Gm44872-201ENSMUST00000207864 420 ntBASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhga3Q91XY5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gm15920-201ENSMUST00000118998 402 ntBASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gm2445-201ENSMUST00000182798 989 ntBASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gm29741-201ENSMUST00000192667 421 ntBASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gm38294-201ENSMUST00000192831 381 ntBASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga3Q91XY5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms