Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Tram1Q91V04 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.69□□□□□ -0.54
Tram1Q91V04 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Tram1Q91V04 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tram1Q91V04 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tram1Q91V04 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.69□□□□□ -0.54
Tram1Q91V04 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Tram1Q91V04 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.69□□□□□ -0.54
Tram1Q91V04 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.69□□□□□ -0.54
Tram1Q91V04 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Gm7461-201ENSMUST00000058918 827 ntBASIC11.69□□□□□ -0.54
Tram1Q91V04 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Tram1Q91V04 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.69□□□□□ -0.54
Tram1Q91V04 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tram1Q91V04 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Tram1Q91V04 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.68□□□□□ -0.54
Tram1Q91V04 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.68□□□□□ -0.54
Tram1Q91V04 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.68□□□□□ -0.54
Tram1Q91V04 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Gm18027-201ENSMUST00000218947 619 ntBASIC11.68□□□□□ -0.54
Tram1Q91V04 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.68□□□□□ -0.54
Tram1Q91V04 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Tram1Q91V04 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tram1Q91V04 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Tram1Q91V04 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tram1Q91V04 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.67□□□□□ -0.54
Tram1Q91V04 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tram1Q91V04 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.67□□□□□ -0.54
Tram1Q91V04 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms