Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpa1Q8VEE4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Gm6973-201ENSMUST00000117080 721 ntBASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Gm11543-201ENSMUST00000120758 370 ntBASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Gm44719-201ENSMUST00000206404 149 ntBASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpa1Q8VEE4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpa1Q8VEE4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms