Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.06□□□□□ -0.32
Lsm1Q8VC85 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm6912-201ENSMUST00000117218 544 ntBASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm24420-201ENSMUST00000176676 59 ntBASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm3436-201ENSMUST00000179930 840 ntBASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm27618-201ENSMUST00000183671 60 ntBASIC13.05□□□□□ -0.32
Lsm1Q8VC85 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm44344-201ENSMUST00000200287 129 ntBASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm5425-201ENSMUST00000214125 459 ntBASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm1Q8VC85 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Gm27680-201ENSMUST00000184192 160 ntBASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Gm27321-201ENSMUST00000185021 205 ntBASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Gm38294-201ENSMUST00000192831 381 ntBASIC13.04□□□□□ -0.32
Lsm1Q8VC85 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms