Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Gm11930-201ENSMUST00000117788 190 ntBASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Gm43058-201ENSMUST00000197645 625 ntBASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zc3h3Q8CHP0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Gm11531-201ENSMUST00000117614 555 ntBASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Gm5051-201ENSMUST00000204085 485 ntBASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zc3h3Q8CHP0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Gm27046-201ENSMUST00000182160 463 ntBASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Gm37444-201ENSMUST00000193605 439 ntBASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Gm44545-201ENSMUST00000208262 746 ntBASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zc3h3Q8CHP0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Zc3h3Q8CHP0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms