Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.36□□□□□ -0.43
Smco1Q8CEZ1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Mir874-201ENSMUST00000104769 76 ntBASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Gm15483-201ENSMUST00000120338 456 ntBASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco1Q8CEZ1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco1Q8CEZ1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms