Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Gm15393-201ENSMUST00000120499 219 ntBASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Gm6916-202ENSMUST00000205523 195 ntBASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Gm9899-201ENSMUST00000065519 555 ntBASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps53Q8CCB4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Gm33320-201ENSMUST00000192232 530 ntBASIC15.81■□□□□ 0.12
Vps53Q8CCB4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps53Q8CCB4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps53Q8CCB4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms