Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lysmd4Q8CC84 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lysmd4Q8CC84 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms