Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd9Q8BYH8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm42550-201ENSMUST00000201553 960 ntBASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm9996-201ENSMUST00000070359 913 ntBASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm43916-201ENSMUST00000205062 967 ntBASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd9Q8BYH8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Gm11591-201ENSMUST00000120063 702 ntBASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Gm13665-201ENSMUST00000120830 528 ntBASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Gm24548-201ENSMUST00000158650 108 ntBASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Gm19353-201ENSMUST00000184561 445 ntBASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Gm37042-201ENSMUST00000193816 581 ntBASIC10.55□□□□□ -0.72
Chd9Q8BYH8 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Chd9Q8BYH8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms