Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trerf1Q8BXJ2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trerf1Q8BXJ2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms