Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smndc1Q8BGT7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Gm44335-201ENSMUST00000196879 141 ntBASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Gm44297-201ENSMUST00000198304 141 ntBASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Gm44346-201ENSMUST00000198851 141 ntBASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Gm45612-201ENSMUST00000211320 160 ntBASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smndc1Q8BGT7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smndc1Q8BGT7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Gm2272-201ENSMUST00000194903 582 ntBASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smndc1Q8BGT7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms