Protein–RNA interactions for Protein: Q80U04

Pja2, E3 ubiquitin-protein ligase Praja-2, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja2Q80U04 Gm27494-201ENSMUST00000184735 189 ntBASIC14.23□□□□□ -0.13
Pja2Q80U04 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pja2Q80U04 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.23□□□□□ -0.13
Pja2Q80U04 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pja2Q80U04 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pja2Q80U04 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Gm25911-201ENSMUST00000157621 56 ntBASIC14.22□□□□□ -0.13
Pja2Q80U04 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.22□□□□□ -0.13
Pja2Q80U04 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pja2Q80U04 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.22□□□□□ -0.13
Pja2Q80U04 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.22□□□□□ -0.13
Pja2Q80U04 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pja2Q80U04 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pja2Q80U04 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Pja2Q80U04 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Gm8000-201ENSMUST00000188378 592 ntBASIC14.21□□□□□ -0.13
Pja2Q80U04 Gm5264-201ENSMUST00000190584 848 ntBASIC14.21□□□□□ -0.13
Pja2Q80U04 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.21□□□□□ -0.13
Pja2Q80U04 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pja2Q80U04 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Pja2Q80U04 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pja2Q80U04 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pja2Q80U04 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pja2Q80U04 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pja2Q80U04 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pja2Q80U04 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pja2Q80U04 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pja2Q80U04 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pja2Q80U04 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pja2Q80U04 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pja2Q80U04 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pja2Q80U04 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms