Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Gm11814-201ENSMUST00000119515 929 ntBASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Gm38144-201ENSMUST00000192790 465 ntBASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh19Q80TF3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Gm18473-201ENSMUST00000220543 868 ntBASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms