Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rad54bQ6PFE3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rad54bQ6PFE3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Gm3436-201ENSMUST00000179930 840 ntBASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Gm43514-201ENSMUST00000198852 424 ntBASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rad54bQ6PFE3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Gm15240-201ENSMUST00000118156 720 ntBASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Gm27397-201ENSMUST00000184997 107 ntBASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rad54bQ6PFE3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms