Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Gm27243-201ENSMUST00000183964 521 ntBASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nup98Q6PFD9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.73■□□□□ 0.11
Nup98Q6PFD9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Gm8227-201ENSMUST00000223306 571 ntBASIC15.73■□□□□ 0.11
Nup98Q6PFD9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Gm8738-201ENSMUST00000172606 329 ntBASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nup98Q6PFD9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm17208-201ENSMUST00000168388 535 ntBASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm21769-201ENSMUST00000211922 111 ntBASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nup98Q6PFD9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms