Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Gm17795-201ENSMUST00000214505 757 ntBASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcc2Q6PDG5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcc2Q6PDG5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcc2Q6PDG5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcc2Q6PDG5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
Smarcc2Q6PDG5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcc2Q6PDG5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcc2Q6PDG5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcc2Q6PDG5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcc2Q6PDG5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcc2Q6PDG5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcc2Q6PDG5 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Gm28631-201ENSMUST00000190740 334 ntBASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smarcc2Q6PDG5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms